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Identification of patient-specific CD4<sup>+</sup> and CD8<sup>+</sup> T cell neoantigens through HLA-unbiased genetic screens.

Chiara M Cattaneo ,
Thomas Battaglia ,
Jos Urbanus ,
Ziva Moravec ,
Rhianne Voogd ,
Rosa de Groot ,
Koen J Hartemink ,
John B A G Haanen ,
Emile E Voest ,
Ton N Schumacher ,
Wouter Scheper

Abstract

Cancer neoantigens that arise from tumor mutations are drivers of tumor-specific T cell responses, but identification of T cell-recognized neoantigens in individual patients is challenging. Previous methods have restricted antigen discovery to selected HLA alleles, thereby limiting the breadth of neoantigen repertoires that can be uncovered. Here, we develop a genetic neoantigen screening system that allows sensitive identification of CD4+ and CD8+ T cell-recognized neoantigens across patients' complete HLA genotypes.

More about this publication

Nature biotechnology

Volume 41
Issue nr. 6
Pages 783-787
Publication date 01-06-2023

Full text links

Publisher website (DOI) 10.1038/s41587-022-01547-0
Europe PubMed Central 36593398
Pubmed 36593398

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