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An explainable longitudinal multi-modal fusion model for predicting neoadjuvant therapy response in women with breast cancer.

Yuan Gao ,
Sofia Ventura-Diaz ,
Xin Wang ,
Muzhen He ,
Zeyan Xu ,
Arlene Weir ,
Hong-Yu Zhou ,
Tianyu Zhang ,
Frederieke H van Duijnhoven ,
Luyi Han ,
Xiaomei Li ,
Anna D'Angelo ,
Valentina Longo ,
Zaiyi Liu ,
Jonas Teuwen ,
Marleen Kok ,
Regina Beets-Tan ,
Hugo M Horlings ,
Tao Tan ,
Ritse Mann

Abstract

Multi-modal image analysis using deep learning (DL) lays the foundation for neoadjuvant treatment (NAT) response monitoring. However, existing methods prioritize extracting multi-modal features to enhance predictive performance, with limited consideration on real-world clinical applicability, particularly in longitudinal NAT scenarios with multi-modal data. Here, we propose the Multi-modal Response Prediction (MRP) system, designed to mimic real-world physician assessments of NAT responses in breast cancer. To enhance feasibility, MRP integrates cross-modal knowledge mining and temporal information embedding strategy to handle missing modalities and remain less affected by different NAT settings. We validated MRP through multi-center studies and multinational reader studies. MRP exhibited comparable robustness to breast radiologists, outperforming humans in predicting pathological complete response in the Pre-NAT phase (ΔAUROC 14% and 10% on in-house and external datasets, respectively). Furthermore, we assessed MRP's clinical utility impact on treatment decision-making. MRP may have profound implications for enrolment into NAT trials and determining surgery extensiveness.

More about this publication

Nature communications

Volume 15
Issue nr. 1
Pages 9613
Publication date 07-11-2024

Full text links

Publisher website (DOI) 10.1038/s41467-024-53450-8
Europe PubMed Central 39511143
Pubmed 39511143

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