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Comparative transcriptomics reveals a mixed basal, club, and hillock epithelial cell identity in castration-resistant prostate cancer.

Samuel P Pitzen ,
Amber N Rudenick ,
Yinjie Qiu ,
Weijie Zhang ,
Sarah A Munro ,
Braedan M McCluskey ,
Colleen Forster ,
Hannah E Bergom ,
Atef Ali ,
Ella Boytim ,
John T Lafin ,
Simon Linder ,
Mazlina Ismail ,
Wout Devlies ,
Conner J Sessions ,
Frank Claessens ,
Steven Joniau ,
Gerhardt Attard ,
Wilbert Zwart ,
Peter S Nelson ,
Eva Corey ,
Yuzhuo Wang ,
Joshua M Lang ,
Himisha Beltran ,
Douglas Strand ,
Emmanuel S Antonarakis ,
Justin Hwang ,
Paari Murugan ,
R Stephanie Huang ,
Scott M Dehm

Abstract

Inhibiting the androgen receptor (AR) is effective for treatment of advanced prostate cancers because of their AR-dependent luminal epithelial cell identity. Tumors progress during therapy to castration-resistant prostate cancer (CRPC) by restoring AR signaling and maintaining luminal identity or by converting through lineage plasticity to a neuroendocrine (NE) identity or double-negative CRPC (DNPC) lacking luminal or NE identities. Here, we show that DNPC cells express genes defining basal, club, and hillock epithelial cells from benign prostate. We identified KLF5 as a regulator of genes defining this mixed basal, club, and hillock cell identity in DNPC models. KLF5-mediated upregulation of RARG uncovered a DNPC sensitivity to growth inhibition by retinoic acid receptor agonists, which down-regulated KLF5 and up-regulated AR. These findings offer CRPC classifications based on prostate epithelial cell identities and nominate KLF5 and RARG as therapeutic targets for CRPC displaying a mixed basal, club, and hillock identity.

More about this publication

Proceedings of the National Academy of Sciences of the United States of America

Volume 122
Issue nr. 6
Pages e2415308122
Publication date 11-02-2025

Full text links

Publisher website (DOI) 10.1073/pnas.2415308122
Europe PubMed Central 39913208
Pubmed 39913208

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