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Multi-omics staging of locally advanced rectal cancer predicts treatment response: a pilot study.

Ilaria Cicalini ,
Antonio Maria Chiarelli ,
Piero Chiacchiaretta ,
David Perpetuini ,
Consuelo Rosa ,
Domenico Mastrodicasa ,
Martina d'Annibale ,
Stefano Trebeschi ,
Francesco Lorenzo Serafini ,
Giulio Cocco ,
Marco Narciso ,
Antonio Corvino ,
Sebastiano Cinalli ,
Domenico Genovesi ,
Paola Lanuti ,
Silvia Valentinuzzi ,
Damiana Pieragostino ,
Davide Brocco ,
Regina G H Beets-Tan ,
Nicola Tinari ,
Stefano L Sensi ,
Liborio Stuppia ,
Piero Del Boccio ,
Massimo Caulo ,
Andrea Delli Pizzi

Abstract

Treatment response assessment of rectal cancer patients is a critical component of personalized cancer care and it allows to identify suitable candidates for organ-preserving strategies. This pilot study employed a novel multi-omics approach combining MRI-based radiomic features and untargeted metabolomics to infer treatment response at staging. The metabolic signature highlighted how tumor cell viability is predictively down-regulated, while the response to oxidative stress was up-regulated in responder patients, showing significantly reduced oxoproline values at baseline compared to non-responder patients (p-value < 10-4). Tumors with a high degree of texture homogeneity, as assessed by radiomics, were more likely to achieve a major pathological response (p-value < 10-3). A machine learning classifier was implemented to summarize the multi-omics information and discriminate responders and non-responders. Combining all available radiomic and metabolomic features, the classifier delivered an AUC of 0.864 (± 0.083, p-value < 10-3) with a best-point sensitivity of 90.9% and a specificity of 81.8%. Our results suggest that a multi-omics approach, integrating radiomics and metabolomic data, can enhance the predictive value of standard MRI and could help to avoid unnecessary surgical treatments and their associated long-term complications.

More about this publication

La Radiologia medica

Volume 129
Issue nr. 5
Pages 712-726
Publication date 01-05-2024

Full text links

Publisher website (DOI) 10.1007/s11547-024-01811-0
Europe PubMed Central 38538828
Pubmed 38538828

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