Publications

Nature

An integrated view of the structure and function of the human 4D nucleome.

Functional maps of a genomic locus reveal confinement of an enhancer by its target gene

Nucleic acids research

Extrusion fountains are restricted by WAPL-dependent cohesin release and CTCF barriers.

bioRxiv : the preprint server for biology

An integrated view of the structure and function of the human 4D nucleome.

bioRxiv : the preprint server for biology

Optimized reporters for multiplexed detection of transcription factor activity.

The regulatory grammar of human promoters uncovered by MPRA-trained deep learning

Nucleic acids research

Optimisation of TP53 reporters by systematic dissection of synthetic TP53 response elements.

Nature

Heritable transcriptional defects from aberrations of nuclear architecture.

Open biology

m6A methylation potentiates cytosolic dsDNA recognition in a sequence-specific manner.

EMBO reports

Cell cycle dynamics of lamina-associated DNA.

Nature genetics

High-throughput identification of human SNPs affecting regulatory element activity.

Methods in molecular biology (Clifton, N.J.)

Rapid Quantitative Evaluation of CRISPR Genome Editing by TIDE and TIDER.

Genome research

Massive reshaping of genome-nuclear lamina interactions during oncogene-induced senescence.

Genome research

Clustering of Drosophila housekeeping promoters facilitates their expression.

Genome research

Small chromosomal regions position themselves autonomously according to their chromatin class.

Cell

Lamina-Associated Domains: Links with Chromosome Architecture, Heterochromatin, and Gene Repression.

Nature biotechnology

Genome-wide mapping of autonomous promoter activity in human cells.

Science (New York, N.Y.)

GENE REGULATION. A HUSH for transgene expression.

EMBO reports

Nuclear lamins are not required for lamina-associated domain organization in mouse embryonic stem cells.

Nucleic acids research

Easy quantitative assessment of genome editing by sequence trace decomposition.

Cell

Chromatin position effects assayed by thousands of reporters integrated in parallel.

PloS one

Differential programming of B cells in AID deficient mice.

Cold Spring Harbor symposia on quantitative biology

Role of the nuclear lamina in genome organization and gene expression.

Chromosoma

Chromatin domains in higher eukaryotes: insights from genome-wide mapping studies.

Nature

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions.

PLoS genetics

Global chromatin domain organization of the Drosophila genome.

Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology

Whole-genome views of chromatin structure.

Genes & development

Distinct HP1 and Su(var)3-9 complexes bind to sets of developmentally coexpressed genes depending on chromosomal location.

BioTechniques

Epigenomic profiling using microarrays.

Proceedings of the National Academy of Sciences of the United States of America

Genomewide analysis of Drosophila GAGA factor target genes reveals context-dependent DNA binding.